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Publications

Nga T T Vu, Kyall R Zenger, Catarina N S Silva, Jarrod L Guppy, Dean R Jerry Population structure, genetic connectivity, and signatures of local adaptation of the giant black tiger shrimp (Penaeus monodon) throughout the Indo–Pacific Region, Genome Biology and Evolution, 16 September 2021

N. Khalilisamani, P. C. Thomson, H. W. Raadsma,  & M. S. Khatkar  Impact of genotypic errors with equal and unequal family contribution on accuracy
of genomic prediction in aquaculture using simulation.
Nature, 15 September 2021

Maria. C. Marín‐Riffo  Herman W. Raadsma  Dean R. Jerry  Greg J. Coman  Mehar S. Khatkar Bioeconomic modelling of hatchery, grow‐out and combined business of Australian black tiger shrimp Penaeus monodon farming.  Reviews in Aquaculture, 06 March 2021

Tansyn H. Noble, Gregory J.Coman, Nicholas M.Wad, Peter C.Thomson, Herman W.Raadsma, Mehar S.Khatkar, Jarrod L.Guppy and Dean R.Jerry (2020)Genetic parameters of Gill-associated virus infection and body weight under commercial conditions in black tiger shrimp, Penaeus monodon .Aquaculture, Volume 528, 15 November 2020, 735580.

Nga T. T. Vu, Kyall R. Zenger, Jarrod L. Guppy, Melony J. Sellars, Catarina N. S. Silva, Shannon R. Kjeldsen & Dean R. JerryFine-scale population structure and evidence for local adaptation in Australian giant black tiger shrimp (Penaeus monodon) using SNP analysisBMC Genomics, 29 September 2020.

Roger Huerlimann, Gregory E. Maes, Michael J. Maxwell, Mehdi Mobli, Bradley S. Launikonis, Dean R. Jerry, Nicholas M. WadeMulti-species transcriptomics reveals evolutionary diversity in the mechanisms regulating shrimp tail muscle excitation-contraction coupling .Gene, 752. 20 August 2020.

Jarrod Lee Guppy, David B. Jones, Shannon R. Kjeldsen, Agnes Le Port, Mehar S. Khatkar, Nicholas M. Wade, Melony J. Sellars, Eike J. Stenig, Herman W. Raadsma, Dean R. Jerry, Kyall R. ZengerDevelopment and validation of a RAD-Seq target-capture based genotyping assay for routine application in advanced black tiger shrimp (Penaeus monodon) breeding programs, BMC Genomics, 5 August 2020.

Md. Mehedi Hasan, Rachel L. Tulloch, Peter C. Thomson, Herman W. Raadsma, Mehar S. Khatkar. Meta-analysis of genetic parameters of production traits in cultured shrimp species. Fish and Fisheries, 14 July 2020.

Shaymaviswanathan Karnaneedi. Roger Huerlimann, Elecia B. Johnston, Roni Nugraha. Thimo Ruethers, Aya C. Taki, Sandip D. Kamath, Nicholas M. Wade, Dean R. Jerry, Andreas L. Lopata. Novel Allergen Discovery through Comprehensive De Novo Transcriptomic Analyses of Five Shrimp Species, Int. J. Mol. Sci. 2021, 22, 32 22 December 2020.

Infante-Villamil, Sandra, Huerlimann, Roger, Jerry, Dean. Microbiome diversity and dysbiosis in aquaculture,  Reviews in Aquaculture  27 October 2020.

Cheryl K.Y. Tan, Jeff A. Cowley, Dean R. Jerry (2019)A Magnetic Bead-Based DNA Extraction Protocol Suitable for High-Throughput Genotyping in Shrimp Breeding ProgramsGenAqua Genetics of Aquaculture Organisms. Available online 6 December 2019

Andrew Foote, David Simma, Mehar Khatkar, Herman Raadsma, Jarrod Guppy, Greg Coman, Erika Giardina, Dean Jerry, Kyall Zenger and Nick Wade (2019)Considerations for Maintaining Family Diversity in Commercially Mass-Spawned Penaeid Shrimp: A Case Study on Penaeus monodonFront. Genet., 12 November 2019.

Sandra Infante-Villamil, Roger Huerlimann, Kelly Condon, Gregory E. Maes, Dean R. Jerry (2019)Bacterial signatures of productivity decay in Penaeus monodon ponds infected with PirA toxinAquaculture. Volume 511, 15 September 2019.

S.E. Berry, R. Huerlimann, S. McWilliam, A. R. FooteD.R. Jerry, N.M. Wade (2019)Stress regulation and tolerance in shrimp: The transcriptomic and physiological response to chronic ammonia exposure in the black tiger shrimp, Penaeus monodon. Fish & Shellfish Immunology. Volume 91, August 2019.

Zenger K.R., Khatkar M.S., Jones D.B.,  Khalisamani N. , Jerry D.R., Raadsma H.W. (2019). Genomic Selection in Aquaculture: Application, Limitations and Opportunities With Special Reference to Marine Shrimp and Pearl OystersFrontiers in Genetics 23 January 2019.

Noble T, Coman G, Wade N, Thomson P, Raadsma H, Khatkar M, Guppy J and Jerry D (2019)Genetic parameters for tolerance to gill-associated virus under challenge-test conditions in the black tiger shrimp (Penaeus monodon).Aquaculture, 516.

Sarah E.Berry, Cedric J.Simon, Andrew R.Foote, Dean R.Jerry, Nicholas M.Wade (2018)Evaluation of baseline haemolymph biochemistry, volume and total body energetics to determine an accurate condition index in the black tiger shrimp, Penaeus monodonScienceDirect Comparative biochemistry and Physiology Part B: Biochemistry and Molecular Biology Volume 228, February 2018, Pages 1-9

Roger Huerlimann, Nicholas M. Wade, Lavinia Gordon, Juan D. Montenegro, Jake Goodall, Sean McWilliam, Matthew Tinning, Kirby Siemering, Erika Giardina, Dallas Donovan, Melony J. Sellars, Jeff A. Cowley, Kelly Condon, Greg J. Coman, Mehar S. Khatkar, Herman W. Raadsma, Gregory E. Maes, Kyall R. Zenger & Dean R. Jerry (2018). De novo assembly, characterization, functional annotation and expression patterns of the black tiger shrimp (Penaeus monodon) transcriptomeScientific Reports 8, Article number: 13553 (2018)

Jarrod L. Guppy, David B. Jones, Dean R. Jerry, Nicholas M. Wade, Herman W. Raadsma, Roger Huerlimann and Kyall R. Zenger (2018). The State of “Omics” Research for Farmed Penaeids: Advances in Research and Impediments to Industry Utilization. Frontiers in Genetics 03 August 2018 00282

NobleT.H, Stratford C.N, Wade N.M, Cowley J.A, Sellars M.J, Coman G.J, Jerry D.R. (2018). PCR testing of single tissue samples can result in misleading data on gill-associated virus infection loads in shrimpScienceDirect Aquaculture Volume 492, 1 July 2018, Pages 91-96

Andrew R.Foote, Chris.N. Stratford, Greg J. Coman. (2018). Passive integrated transponder (PIT) tagging black tiger shrimp, Penaeus monodon: Applications for breeding programs. ScienceDirect Aquaculture Volume 491, 1 April 2018, Pages 321-324

T. H. Noble, G.J. Coman, J. A. Cowley, N. Wade, M. J. Sellars, D. R. Jerry (2017). Comparison of methods for uniformly challenging Black Tiger shrimp (Penaeus monodon) with gill-associated virusAquaculture. Available online 12 February 2017

Khatkar, Mehar S (2017). Book Chapter. Genomic Selection in Aquaculture Breeding ProgramsBioinformatics in Aquaculture: Principles and Methods. Ed Zhanjiang (John) Liu. Wiley-Blackwell, 2017. 380-433.

Wei, J., Glaves, R. S. E., Sellars, M. J., Xiang, J., & Hertzler, P. L. (2016). Expression of the prospective mesoderm genes twist, snail, and mef2 in penaeid shrimpDevelopment genes and evolution226(4), 317-324.